Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6d-5A0A075B6B9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6d-5A0A075B6B9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6d-5A0A075B6B9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6d-5A0A075B6B9 Terc-201ENSMUST00000082862 423 ntBASIC17.34■□□□□ 0.37
Trav6d-5A0A075B6B9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Trav6d-5A0A075B6B9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6d-5A0A075B6B9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6d-5A0A075B6B9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6d-5A0A075B6B9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.33■□□□□ 0.36
Trav6d-5A0A075B6B9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6d-5A0A075B6B9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6d-5A0A075B6B9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6d-5A0A075B6B9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6d-5A0A075B6B9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.32■□□□□ 0.36
Trav6d-5A0A075B6B9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Trav6d-5A0A075B6B9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6d-5A0A075B6B9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6d-5A0A075B6B9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6d-5A0A075B6B9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6d-5A0A075B6B9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Trav6d-5A0A075B6B9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6d-5A0A075B6B9 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.31■□□□□ 0.36
Trav6d-5A0A075B6B9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6d-5A0A075B6B9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6d-5A0A075B6B9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6d-5A0A075B6B9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Trav6d-5A0A075B6B9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav6d-5A0A075B6B9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6d-5A0A075B6B9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6d-5A0A075B6B9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Trav6d-5A0A075B6B9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trav6d-5A0A075B6B9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trav6d-5A0A075B6B9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6d-5A0A075B6B9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6d-5A0A075B6B9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.29■□□□□ 0.36
Trav6d-5A0A075B6B9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trav6d-5A0A075B6B9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trav6d-5A0A075B6B9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6d-5A0A075B6B9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trav6d-5A0A075B6B9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trav6d-5A0A075B6B9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav6d-5A0A075B6B9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6d-5A0A075B6B9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav6d-5A0A075B6B9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6d-5A0A075B6B9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trav6d-5A0A075B6B9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trav6d-5A0A075B6B9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6d-5A0A075B6B9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6d-5A0A075B6B9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6d-5A0A075B6B9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6d-5A0A075B6B9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6d-5A0A075B6B9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6d-5A0A075B6B9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6d-5A0A075B6B9 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.27■□□□□ 0.35
Trav6d-5A0A075B6B9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav6d-5A0A075B6B9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trav6d-5A0A075B6B9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6d-5A0A075B6B9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav6d-5A0A075B6B9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
Trav6d-5A0A075B6B9 Mir3960-201ENSMUST00000198213 73 ntBASIC17.26■□□□□ 0.35
Trav6d-5A0A075B6B9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6d-5A0A075B6B9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.26■□□□□ 0.35
Trav6d-5A0A075B6B9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6d-5A0A075B6B9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.26■□□□□ 0.35
Trav6d-5A0A075B6B9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6d-5A0A075B6B9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6d-5A0A075B6B9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6d-5A0A075B6B9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6d-5A0A075B6B9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6d-5A0A075B6B9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6d-5A0A075B6B9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-5A0A075B6B9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-5A0A075B6B9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-5A0A075B6B9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-5A0A075B6B9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trav6d-5A0A075B6B9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.25■□□□□ 0.35
Trav6d-5A0A075B6B9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-5A0A075B6B9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-5A0A075B6B9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-5A0A075B6B9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-5A0A075B6B9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-5A0A075B6B9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-5A0A075B6B9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-5A0A075B6B9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trav6d-5A0A075B6B9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6d-5A0A075B6B9 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.24■□□□□ 0.35
Trav6d-5A0A075B6B9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6d-5A0A075B6B9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6d-5A0A075B6B9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6d-5A0A075B6B9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Trav6d-5A0A075B6B9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-5A0A075B6B9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-5A0A075B6B9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-5A0A075B6B9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-5A0A075B6B9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-5A0A075B6B9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-5A0A075B6B9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trav6d-5A0A075B6B9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-5A0A075B6B9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms