Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6n-7A0A075B6A6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6n-7A0A075B6A6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Trav6n-7A0A075B6A6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6n-7A0A075B6A6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6n-7A0A075B6A6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Trav6n-7A0A075B6A6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6n-7A0A075B6A6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav6n-7A0A075B6A6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.22■□□□□ 0.51
Trav6n-7A0A075B6A6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trav6n-7A0A075B6A6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6n-7A0A075B6A6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trav6n-7A0A075B6A6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6n-7A0A075B6A6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trav6n-7A0A075B6A6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Trav6n-7A0A075B6A6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6n-7A0A075B6A6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6n-7A0A075B6A6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Trav6n-7A0A075B6A6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6n-7A0A075B6A6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6n-7A0A075B6A6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6n-7A0A075B6A6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.2■□□□□ 0.5
Trav6n-7A0A075B6A6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6n-7A0A075B6A6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.2■□□□□ 0.5
Trav6n-7A0A075B6A6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.2■□□□□ 0.5
Trav6n-7A0A075B6A6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.2■□□□□ 0.5
Trav6n-7A0A075B6A6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6n-7A0A075B6A6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6n-7A0A075B6A6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6n-7A0A075B6A6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6n-7A0A075B6A6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Trav6n-7A0A075B6A6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6n-7A0A075B6A6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.19■□□□□ 0.5
Trav6n-7A0A075B6A6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.19■□□□□ 0.5
Trav6n-7A0A075B6A6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.19■□□□□ 0.5
Trav6n-7A0A075B6A6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trav6n-7A0A075B6A6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trav6n-7A0A075B6A6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trav6n-7A0A075B6A6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6n-7A0A075B6A6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6n-7A0A075B6A6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6n-7A0A075B6A6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6n-7A0A075B6A6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6n-7A0A075B6A6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6n-7A0A075B6A6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6n-7A0A075B6A6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6n-7A0A075B6A6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6n-7A0A075B6A6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6n-7A0A075B6A6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6n-7A0A075B6A6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6n-7A0A075B6A6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6n-7A0A075B6A6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6n-7A0A075B6A6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6n-7A0A075B6A6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6n-7A0A075B6A6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trav6n-7A0A075B6A6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav6n-7A0A075B6A6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trav6n-7A0A075B6A6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trav6n-7A0A075B6A6 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.17■□□□□ 0.5
Trav6n-7A0A075B6A6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6n-7A0A075B6A6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6n-7A0A075B6A6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6n-7A0A075B6A6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6n-7A0A075B6A6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6n-7A0A075B6A6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6n-7A0A075B6A6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.17■□□□□ 0.5
Trav6n-7A0A075B6A6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6n-7A0A075B6A6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6n-7A0A075B6A6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav6n-7A0A075B6A6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6n-7A0A075B6A6 Gm45444-201ENSMUST00000211394 898 ntBASIC18.16■□□□□ 0.5
Trav6n-7A0A075B6A6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6n-7A0A075B6A6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6n-7A0A075B6A6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trav6n-7A0A075B6A6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Trav6n-7A0A075B6A6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav6n-7A0A075B6A6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6n-7A0A075B6A6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6n-7A0A075B6A6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav6n-7A0A075B6A6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav6n-7A0A075B6A6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Trav6n-7A0A075B6A6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6n-7A0A075B6A6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6n-7A0A075B6A6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Trav6n-7A0A075B6A6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6n-7A0A075B6A6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6n-7A0A075B6A6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.13■□□□□ 0.49
Trav6n-7A0A075B6A6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6n-7A0A075B6A6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trav6n-7A0A075B6A6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6n-7A0A075B6A6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav6n-7A0A075B6A6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trav6n-7A0A075B6A6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6n-7A0A075B6A6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6n-7A0A075B6A6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trav6n-7A0A075B6A6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav6n-7A0A075B6A6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Trav6n-7A0A075B6A6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6n-7A0A075B6A6 Gm13238-201ENSMUST00000117655 780 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms