Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.79■□□□□ 0.44
Trav5-4A0A075B652 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav5-4A0A075B652 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav5-4A0A075B652 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav5-4A0A075B652 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav5-4A0A075B652 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav5-4A0A075B652 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav5-4A0A075B652 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav5-4A0A075B652 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav5-4A0A075B652 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Trav5-4A0A075B652 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav5-4A0A075B652 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
Trav5-4A0A075B652 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trav5-4A0A075B652 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trav5-4A0A075B652 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trav5-4A0A075B652 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav5-4A0A075B652 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.77■□□□□ 0.44
Trav5-4A0A075B652 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav5-4A0A075B652 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav5-4A0A075B652 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.77■□□□□ 0.44
Trav5-4A0A075B652 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav5-4A0A075B652 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.77■□□□□ 0.43
Trav5-4A0A075B652 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trav5-4A0A075B652 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trav5-4A0A075B652 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav5-4A0A075B652 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav5-4A0A075B652 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav5-4A0A075B652 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.76■□□□□ 0.43
Trav5-4A0A075B652 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav5-4A0A075B652 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trav5-4A0A075B652 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5-4A0A075B652 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav5-4A0A075B652 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.75■□□□□ 0.43
Trav5-4A0A075B652 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5-4A0A075B652 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5-4A0A075B652 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5-4A0A075B652 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5-4A0A075B652 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5-4A0A075B652 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trav5-4A0A075B652 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5-4A0A075B652 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5-4A0A075B652 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav5-4A0A075B652 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5-4A0A075B652 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5-4A0A075B652 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.74■□□□□ 0.43
Trav5-4A0A075B652 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5-4A0A075B652 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav5-4A0A075B652 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav5-4A0A075B652 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5-4A0A075B652 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5-4A0A075B652 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5-4A0A075B652 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5-4A0A075B652 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5-4A0A075B652 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav5-4A0A075B652 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav5-4A0A075B652 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav5-4A0A075B652 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.73■□□□□ 0.43
Trav5-4A0A075B652 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.73■□□□□ 0.43
Trav5-4A0A075B652 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav5-4A0A075B652 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.73■□□□□ 0.43
Trav5-4A0A075B652 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trav5-4A0A075B652 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav5-4A0A075B652 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav5-4A0A075B652 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav5-4A0A075B652 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav5-4A0A075B652 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trav5-4A0A075B652 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav5-4A0A075B652 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trav5-4A0A075B652 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-4A0A075B652 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-4A0A075B652 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-4A0A075B652 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-4A0A075B652 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-4A0A075B652 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-4A0A075B652 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-4A0A075B652 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-4A0A075B652 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-4A0A075B652 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-4A0A075B652 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-4A0A075B652 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-4A0A075B652 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav5-4A0A075B652 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav5-4A0A075B652 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav5-4A0A075B652 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.71■□□□□ 0.43
Trav5-4A0A075B652 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav5-4A0A075B652 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav5-4A0A075B652 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav5-4A0A075B652 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav5-4A0A075B652 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav5-4A0A075B652 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav5-4A0A075B652 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav5-4A0A075B652 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.71■□□□□ 0.42
Trav5-4A0A075B652 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav5-4A0A075B652 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-4A0A075B652 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-4A0A075B652 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-4A0A075B652 Gm11175-201ENSMUST00000116172 543 ntBASIC17.7■□□□□ 0.42
Trav5-4A0A075B652 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Trav5-4A0A075B652 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-4A0A075B652 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms