Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15-2-dv6-2A0A075B650 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15-2-dv6-2A0A075B650 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trav15-2-dv6-2A0A075B650 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15-2-dv6-2A0A075B650 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15-2-dv6-2A0A075B650 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15-2-dv6-2A0A075B650 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trav15-2-dv6-2A0A075B650 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav15-2-dv6-2A0A075B650 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15-2-dv6-2A0A075B650 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15-2-dv6-2A0A075B650 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15-2-dv6-2A0A075B650 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15-2-dv6-2A0A075B650 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.52■□□□□ 0.4
Trav15-2-dv6-2A0A075B650 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15-2-dv6-2A0A075B650 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.51■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.5■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.5■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.47■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15-2-dv6-2A0A075B650 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.43■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.43■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.41■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms