Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.71■□□□□ 0.1
Trav12-3A0A075B648 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-3A0A075B648 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav12-3A0A075B648 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-3A0A075B648 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-3A0A075B648 Gm26115-201ENSMUST00000175605 87 ntBASIC15.7■□□□□ 0.1
Trav12-3A0A075B648 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav12-3A0A075B648 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav12-3A0A075B648 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12-3A0A075B648 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12-3A0A075B648 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12-3A0A075B648 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12-3A0A075B648 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12-3A0A075B648 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12-3A0A075B648 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12-3A0A075B648 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-3A0A075B648 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Trav12-3A0A075B648 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-3A0A075B648 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.68■□□□□ 0.1
Trav12-3A0A075B648 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-3A0A075B648 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-3A0A075B648 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-3A0A075B648 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-3A0A075B648 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav12-3A0A075B648 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav12-3A0A075B648 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-3A0A075B648 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-3A0A075B648 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-3A0A075B648 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-3A0A075B648 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-3A0A075B648 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-3A0A075B648 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-3A0A075B648 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-3A0A075B648 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-3A0A075B648 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-3A0A075B648 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Trav12-3A0A075B648 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-3A0A075B648 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12-3A0A075B648 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12-3A0A075B648 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12-3A0A075B648 Gm22567-201ENSMUST00000175542 342 ntBASIC15.66■□□□□ 0.1
Trav12-3A0A075B648 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12-3A0A075B648 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12-3A0A075B648 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12-3A0A075B648 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12-3A0A075B648 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-3A0A075B648 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-3A0A075B648 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Trav12-3A0A075B648 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-3A0A075B648 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-3A0A075B648 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Trav12-3A0A075B648 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12-3A0A075B648 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12-3A0A075B648 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav12-3A0A075B648 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12-3A0A075B648 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12-3A0A075B648 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav12-3A0A075B648 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12-3A0A075B648 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav12-3A0A075B648 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-3A0A075B648 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-3A0A075B648 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-3A0A075B648 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-3A0A075B648 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-3A0A075B648 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav12-3A0A075B648 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-3A0A075B648 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-3A0A075B648 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12-3A0A075B648 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12-3A0A075B648 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12-3A0A075B648 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12-3A0A075B648 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav12-3A0A075B648 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12-3A0A075B648 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-3A0A075B648 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-3A0A075B648 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-3A0A075B648 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-3A0A075B648 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav12-3A0A075B648 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-3A0A075B648 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.6■□□□□ 0.09
Trav12-3A0A075B648 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12-3A0A075B648 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12-3A0A075B648 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12-3A0A075B648 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12-3A0A075B648 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav12-3A0A075B648 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12-3A0A075B648 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12-3A0A075B648 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trav12-3A0A075B648 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav12-3A0A075B648 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav12-3A0A075B648 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav12-3A0A075B648 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12-3A0A075B648 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Trav12-3A0A075B648 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12-3A0A075B648 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trav12-3A0A075B648 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12-3A0A075B648 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12-3A0A075B648 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-3A0A075B648 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-3A0A075B648 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms