Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav14n-3A0A075B645 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav14n-3A0A075B645 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav14n-3A0A075B645 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav14n-3A0A075B645 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav14n-3A0A075B645 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav14n-3A0A075B645 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav14n-3A0A075B645 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav14n-3A0A075B645 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav14n-3A0A075B645 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav14n-3A0A075B645 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav14n-3A0A075B645 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav14n-3A0A075B645 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav14n-3A0A075B645 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav14n-3A0A075B645 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav14n-3A0A075B645 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Trav14n-3A0A075B645 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trav14n-3A0A075B645 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav14n-3A0A075B645 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Trav14n-3A0A075B645 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav14n-3A0A075B645 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav14n-3A0A075B645 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav14n-3A0A075B645 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav14n-3A0A075B645 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trav14n-3A0A075B645 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav14n-3A0A075B645 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav14n-3A0A075B645 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav14n-3A0A075B645 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav14n-3A0A075B645 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav14n-3A0A075B645 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.15■□□□□ 0.18
Trav14n-3A0A075B645 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav14n-3A0A075B645 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav14n-3A0A075B645 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav14n-3A0A075B645 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trav14n-3A0A075B645 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav14n-3A0A075B645 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav14n-3A0A075B645 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav14n-3A0A075B645 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav14n-3A0A075B645 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav14n-3A0A075B645 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav14n-3A0A075B645 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav14n-3A0A075B645 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav14n-3A0A075B645 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav14n-3A0A075B645 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav14n-3A0A075B645 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav14n-3A0A075B645 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav14n-3A0A075B645 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav14n-3A0A075B645 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav14n-3A0A075B645 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav14n-3A0A075B645 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trav14n-3A0A075B645 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Trav14n-3A0A075B645 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Trav14n-3A0A075B645 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav14n-3A0A075B645 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav14n-3A0A075B645 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav14n-3A0A075B645 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav14n-3A0A075B645 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav14n-3A0A075B645 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav14n-3A0A075B645 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav14n-3A0A075B645 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trav14n-3A0A075B645 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav14n-3A0A075B645 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav14n-3A0A075B645 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav14n-3A0A075B645 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav14n-3A0A075B645 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav14n-3A0A075B645 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav14n-3A0A075B645 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trav14n-3A0A075B645 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.1■□□□□ 0.17
Trav14n-3A0A075B645 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav14n-3A0A075B645 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav14n-3A0A075B645 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav14n-3A0A075B645 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav14n-3A0A075B645 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav14n-3A0A075B645 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav14n-3A0A075B645 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav14n-3A0A075B645 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav14n-3A0A075B645 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav14n-3A0A075B645 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav14n-3A0A075B645 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav14n-3A0A075B645 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trav14n-3A0A075B645 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav14n-3A0A075B645 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav14n-3A0A075B645 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Trav14n-3A0A075B645 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav14n-3A0A075B645 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Trav14n-3A0A075B645 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.08■□□□□ 0.17
Trav14n-3A0A075B645 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav14n-3A0A075B645 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav14n-3A0A075B645 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav14n-3A0A075B645 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.08■□□□□ 0.16
Trav14n-3A0A075B645 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav14n-3A0A075B645 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav14n-3A0A075B645 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav14n-3A0A075B645 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav14n-3A0A075B645 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav14n-3A0A075B645 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav14n-3A0A075B645 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav14n-3A0A075B645 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav14n-3A0A075B645 Gm45855-201ENSMUST00000212546 880 ntBASIC16.07■□□□□ 0.16
Trav14n-3A0A075B645 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms