Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-6A0A075B603 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-6A0A075B603 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav6-6A0A075B603 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-6A0A075B603 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav6-6A0A075B603 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav6-6A0A075B603 AC153911.1-201ENSMUST00000220378 758 ntBASIC15.89■□□□□ 0.13
Trav6-6A0A075B603 Gm9812-201ENSMUST00000061934 968 ntBASIC15.89■□□□□ 0.13
Trav6-6A0A075B603 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-6A0A075B603 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav6-6A0A075B603 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav6-6A0A075B603 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-6A0A075B603 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav6-6A0A075B603 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav6-6A0A075B603 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-6A0A075B603 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-6A0A075B603 Mir3960-201ENSMUST00000198213 73 ntBASIC15.88■□□□□ 0.13
Trav6-6A0A075B603 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trav6-6A0A075B603 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav6-6A0A075B603 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav6-6A0A075B603 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-6A0A075B603 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-6A0A075B603 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.88■□□□□ 0.13
Trav6-6A0A075B603 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-6A0A075B603 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-6A0A075B603 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.87■□□□□ 0.13
Trav6-6A0A075B603 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-6A0A075B603 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.87■□□□□ 0.13
Trav6-6A0A075B603 Gm11599-201ENSMUST00000118720 878 ntBASIC15.87■□□□□ 0.13
Trav6-6A0A075B603 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.87■□□□□ 0.13
Trav6-6A0A075B603 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-6A0A075B603 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-6A0A075B603 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-6A0A075B603 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-6A0A075B603 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-6A0A075B603 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-6A0A075B603 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav6-6A0A075B603 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav6-6A0A075B603 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav6-6A0A075B603 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-6A0A075B603 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.86■□□□□ 0.13
Trav6-6A0A075B603 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-6A0A075B603 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-6A0A075B603 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav6-6A0A075B603 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-6A0A075B603 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-6A0A075B603 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-6A0A075B603 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-6A0A075B603 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav6-6A0A075B603 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav6-6A0A075B603 Gm12818-201ENSMUST00000117562 1349 ntBASIC15.85■□□□□ 0.13
Trav6-6A0A075B603 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-6A0A075B603 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-6A0A075B603 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-6A0A075B603 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-6A0A075B603 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-6A0A075B603 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav6-6A0A075B603 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-6A0A075B603 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-6A0A075B603 AC122317.2-201ENSMUST00000218708 1248 ntBASIC15.84■□□□□ 0.13
Trav6-6A0A075B603 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-6A0A075B603 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav6-6A0A075B603 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Trav6-6A0A075B603 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6-6A0A075B603 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-6A0A075B603 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Trav6-6A0A075B603 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-6A0A075B603 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-6A0A075B603 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-6A0A075B603 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-6A0A075B603 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-6A0A075B603 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-6A0A075B603 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-6A0A075B603 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-6A0A075B603 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav6-6A0A075B603 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav6-6A0A075B603 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-6A0A075B603 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-6A0A075B603 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-6A0A075B603 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-6A0A075B603 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav6-6A0A075B603 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
Trav6-6A0A075B603 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav6-6A0A075B603 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-6A0A075B603 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-6A0A075B603 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-6A0A075B603 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-6A0A075B603 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-6A0A075B603 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-6A0A075B603 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-6A0A075B603 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-6A0A075B603 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav6-6A0A075B603 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC15.8■□□□□ 0.12
Trav6-6A0A075B603 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.8■□□□□ 0.12
Trav6-6A0A075B603 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-6A0A075B603 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Trav6-6A0A075B603 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav6-6A0A075B603 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-6A0A075B603 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.8■□□□□ 0.12
Trav6-6A0A075B603 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms