Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav1A0A075B5Z4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Trav1A0A075B5Z4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Trav1A0A075B5Z4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav1A0A075B5Z4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.03■□□□□ 0.8
Trav1A0A075B5Z4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav1A0A075B5Z4 Gm27502-201ENSMUST00000183495 199 ntBASIC20.03■□□□□ 0.8
Trav1A0A075B5Z4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav1A0A075B5Z4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav1A0A075B5Z4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav1A0A075B5Z4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trav1A0A075B5Z4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav1A0A075B5Z4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav1A0A075B5Z4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav1A0A075B5Z4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav1A0A075B5Z4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trav1A0A075B5Z4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trav1A0A075B5Z4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.02■□□□□ 0.79
Trav1A0A075B5Z4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Trav1A0A075B5Z4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav1A0A075B5Z4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Trav1A0A075B5Z4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav1A0A075B5Z4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav1A0A075B5Z4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Trav1A0A075B5Z4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trav1A0A075B5Z4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav1A0A075B5Z4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav1A0A075B5Z4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav1A0A075B5Z4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trav1A0A075B5Z4 Gm14523-201ENSMUST00000117260 558 ntBASIC20■□□□□ 0.79
Trav1A0A075B5Z4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav1A0A075B5Z4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav1A0A075B5Z4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20■□□□□ 0.79
Trav1A0A075B5Z4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20■□□□□ 0.79
Trav1A0A075B5Z4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trav1A0A075B5Z4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20■□□□□ 0.79
Trav1A0A075B5Z4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav1A0A075B5Z4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trav1A0A075B5Z4 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.99■□□□□ 0.79
Trav1A0A075B5Z4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav1A0A075B5Z4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.98■□□□□ 0.79
Trav1A0A075B5Z4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav1A0A075B5Z4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Trav1A0A075B5Z4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav1A0A075B5Z4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Trav1A0A075B5Z4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav1A0A075B5Z4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.97■□□□□ 0.79
Trav1A0A075B5Z4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.97■□□□□ 0.79
Trav1A0A075B5Z4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.97■□□□□ 0.79
Trav1A0A075B5Z4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav1A0A075B5Z4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trav1A0A075B5Z4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav1A0A075B5Z4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav1A0A075B5Z4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav1A0A075B5Z4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.96■□□□□ 0.79
Trav1A0A075B5Z4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav1A0A075B5Z4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav1A0A075B5Z4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav1A0A075B5Z4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav1A0A075B5Z4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav1A0A075B5Z4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav1A0A075B5Z4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav1A0A075B5Z4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav1A0A075B5Z4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav1A0A075B5Z4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trav1A0A075B5Z4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav1A0A075B5Z4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav1A0A075B5Z4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav1A0A075B5Z4 Gm7332-201ENSMUST00000118351 454 ntBASIC19.93■□□□□ 0.78
Trav1A0A075B5Z4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.93■□□□□ 0.78
Trav1A0A075B5Z4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.93■□□□□ 0.78
Trav1A0A075B5Z4 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.93■□□□□ 0.78
Trav1A0A075B5Z4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav1A0A075B5Z4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav1A0A075B5Z4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav1A0A075B5Z4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trav1A0A075B5Z4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav1A0A075B5Z4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav1A0A075B5Z4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav1A0A075B5Z4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav1A0A075B5Z4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav1A0A075B5Z4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav1A0A075B5Z4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav1A0A075B5Z4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.91■□□□□ 0.78
Trav1A0A075B5Z4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav1A0A075B5Z4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav1A0A075B5Z4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav1A0A075B5Z4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav1A0A075B5Z4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trav1A0A075B5Z4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav1A0A075B5Z4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav1A0A075B5Z4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav1A0A075B5Z4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav1A0A075B5Z4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav1A0A075B5Z4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav1A0A075B5Z4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trav1A0A075B5Z4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.9■□□□□ 0.78
Trav1A0A075B5Z4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav1A0A075B5Z4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav1A0A075B5Z4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms