Protein–RNA interactions for Protein: A0A075B5W3

Ighv1-53, Immunoglobulin heavy variable 1-53 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-53A0A075B5W3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-53A0A075B5W3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.21■□□□□ 0.18
Ighv1-53A0A075B5W3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ighv1-53A0A075B5W3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.2■□□□□ 0.18
Ighv1-53A0A075B5W3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-53A0A075B5W3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.2■□□□□ 0.18
Ighv1-53A0A075B5W3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Ighv1-53A0A075B5W3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.2■□□□□ 0.18
Ighv1-53A0A075B5W3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Ighv1-53A0A075B5W3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-53A0A075B5W3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-53A0A075B5W3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-53A0A075B5W3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ighv1-53A0A075B5W3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-53A0A075B5W3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.19■□□□□ 0.18
Ighv1-53A0A075B5W3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-53A0A075B5W3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-53A0A075B5W3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-53A0A075B5W3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-53A0A075B5W3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-53A0A075B5W3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-53A0A075B5W3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-53A0A075B5W3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-53A0A075B5W3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-53A0A075B5W3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-53A0A075B5W3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ighv1-53A0A075B5W3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-53A0A075B5W3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-53A0A075B5W3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-53A0A075B5W3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-53A0A075B5W3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-53A0A075B5W3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Ighv1-53A0A075B5W3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.16■□□□□ 0.18
Ighv1-53A0A075B5W3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Ighv1-53A0A075B5W3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-53A0A075B5W3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-53A0A075B5W3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-53A0A075B5W3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-53A0A075B5W3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Ighv1-53A0A075B5W3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-53A0A075B5W3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-53A0A075B5W3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-53A0A075B5W3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-53A0A075B5W3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-53A0A075B5W3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-53A0A075B5W3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-53A0A075B5W3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-53A0A075B5W3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.14■□□□□ 0.17
Ighv1-53A0A075B5W3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-53A0A075B5W3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-53A0A075B5W3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-53A0A075B5W3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ighv1-53A0A075B5W3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-53A0A075B5W3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-53A0A075B5W3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ighv1-53A0A075B5W3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-53A0A075B5W3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-53A0A075B5W3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-53A0A075B5W3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-53A0A075B5W3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ighv1-53A0A075B5W3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-53A0A075B5W3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-53A0A075B5W3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-53A0A075B5W3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-53A0A075B5W3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-53A0A075B5W3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-53A0A075B5W3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-53A0A075B5W3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ighv1-53A0A075B5W3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ighv1-53A0A075B5W3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-53A0A075B5W3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-53A0A075B5W3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-53A0A075B5W3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.11■□□□□ 0.17
Ighv1-53A0A075B5W3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-53A0A075B5W3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-53A0A075B5W3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Ighv1-53A0A075B5W3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-53A0A075B5W3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.1■□□□□ 0.17
Ighv1-53A0A075B5W3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-53A0A075B5W3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-53A0A075B5W3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ighv1-53A0A075B5W3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-53A0A075B5W3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-53A0A075B5W3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.1■□□□□ 0.17
Ighv1-53A0A075B5W3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.09■□□□□ 0.17
Ighv1-53A0A075B5W3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-53A0A075B5W3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-53A0A075B5W3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-53A0A075B5W3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-53A0A075B5W3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-53A0A075B5W3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-53A0A075B5W3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-53A0A075B5W3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ighv1-53A0A075B5W3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ighv1-53A0A075B5W3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-53A0A075B5W3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-53A0A075B5W3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.08■□□□□ 0.16
Ighv1-53A0A075B5W3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.08■□□□□ 0.16
Ighv1-53A0A075B5W3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ighv1-53A0A075B5W3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms