Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Auts2-212ENSMUST00000178555 309 ntBASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Gm44855-201ENSMUST00000205725 362 ntBASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Gm5354-201ENSMUST00000182417 973 ntBASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn6Q9Z262 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Gm15678-201ENSMUST00000117573 960 ntBASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.59□□□□□ -0.39
Cldn6Q9Z262 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn6Q9Z262 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms