Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Gm13369-201ENSMUST00000119442 987 ntBASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim54Q9ERP3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Gm15198-201ENSMUST00000117283 177 ntBASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Gm1335-201ENSMUST00000121653 386 ntBASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim54Q9ERP3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms