Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chaf1bQ9D0N7 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Gm11745-201ENSMUST00000121669 448 ntBASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chaf1bQ9D0N7 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.62□□□□□ -0.39
Chaf1bQ9D0N7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Gm13015-201ENSMUST00000118674 204 ntBASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chaf1bQ9D0N7 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms