Protein–RNA interactions for Protein: Q9CRA7

Atp5s, ATP synthase subunit s, mitochondrial, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp5sQ9CRA7 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Gm15678-201ENSMUST00000117573 960 ntBASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Rpph1-201ENSMUST00000175096 319 ntBASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Ank2-226ENSMUST00000189368 339 ntBASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atp5sQ9CRA7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Gm17968-201ENSMUST00000194902 784 ntBASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Mir497b-201ENSMUST00000093601 125 ntBASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.3□□□□□ -0.6
Atp5sQ9CRA7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atp5sQ9CRA7 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Atp5sQ9CRA7 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atp5sQ9CRA7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Atp5sQ9CRA7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atp5sQ9CRA7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.29□□□□□ -0.6
Atp5sQ9CRA7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.29□□□□□ -0.6
Atp5sQ9CRA7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atp5sQ9CRA7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atp5sQ9CRA7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atp5sQ9CRA7 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atp5sQ9CRA7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Atp5sQ9CRA7 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atp5sQ9CRA7 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms