Protein–RNA interactions for Protein: Q9CQ48

Nudcd2, NudC domain-containing protein 2, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd2Q9CQ48 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Gm1401-201ENSMUST00000122048 772 ntBASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Rprl2-201ENSMUST00000157150 290 ntBASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Gm18049-201ENSMUST00000208909 581 ntBASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nudcd2Q9CQ48 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nudcd2Q9CQ48 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Nudcd2Q9CQ48 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Nudcd2Q9CQ48 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nudcd2Q9CQ48 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nudcd2Q9CQ48 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nudcd2Q9CQ48 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nudcd2Q9CQ48 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nudcd2Q9CQ48 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nudcd2Q9CQ48 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nudcd2Q9CQ48 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nudcd2Q9CQ48 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nudcd2Q9CQ48 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.52□□□□□ -0.57
Nudcd2Q9CQ48 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nudcd2Q9CQ48 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Nudcd2Q9CQ48 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms