Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Gm11918-201ENSMUST00000121660 179 ntBASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Gm45384-201ENSMUST00000210451 277 ntBASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Matn2-206ENSMUST00000228570 2798 ntBASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Gm12928-201ENSMUST00000117115 573 ntBASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Gm9794-201ENSMUST00000202370 423 ntBASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha9Q91Y11 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Mir874-201ENSMUST00000104769 76 ntBASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Gm5687-201ENSMUST00000118252 640 ntBASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Gm45841-201ENSMUST00000207700 164 ntBASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Gm8463-201ENSMUST00000208573 613 ntBASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Itm2b-204ENSMUST00000228637 783 ntBASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms