Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 Gm5279-201ENSMUST00000199575 745 ntBASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 Syt7-204ENSMUST00000223586 1344 ntBASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb13Q91Y06 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb13Q91Y06 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb13Q91Y06 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.58□□□□□ -0.23
Pcdhb13Q91Y06 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb13Q91Y06 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb13Q91Y06 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Gm43094-201ENSMUST00000196549 921 ntBASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Gm18041-201ENSMUST00000218210 618 ntBASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Gm24447-201ENSMUST00000083977 338 ntBASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb13Q91Y06 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Gm22189-201ENSMUST00000103822 86 ntBASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Gm12485-201ENSMUST00000119641 291 ntBASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb13Q91Y06 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb13Q91Y06 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb13Q91Y06 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb13Q91Y06 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb13Q91Y06 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb13Q91Y06 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb13Q91Y06 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdhb13Q91Y06 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb13Q91Y06 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb13Q91Y06 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms