Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.29□□□□□ -0.28
Vsx1Q91V10 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.29□□□□□ -0.28
Vsx1Q91V10 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.29□□□□□ -0.28
Vsx1Q91V10 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.29□□□□□ -0.28
Vsx1Q91V10 Gm43138-201ENSMUST00000199123 708 ntBASIC13.29□□□□□ -0.28
Vsx1Q91V10 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Gm5363-201ENSMUST00000211927 938 ntBASIC13.29□□□□□ -0.28
Vsx1Q91V10 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Gm24447-201ENSMUST00000083977 338 ntBASIC13.29□□□□□ -0.28
Vsx1Q91V10 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.29□□□□□ -0.28
Vsx1Q91V10 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.28□□□□□ -0.28
Vsx1Q91V10 Gm16505-201ENSMUST00000179981 232 ntBASIC13.28□□□□□ -0.28
Vsx1Q91V10 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Gm29608-201ENSMUST00000190444 463 ntBASIC13.28□□□□□ -0.28
Vsx1Q91V10 Rps4l-202ENSMUST00000204242 789 ntBASIC13.28□□□□□ -0.28
Vsx1Q91V10 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.28□□□□□ -0.28
Vsx1Q91V10 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.28□□□□□ -0.28
Vsx1Q91V10 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx1Q91V10 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vsx1Q91V10 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vsx1Q91V10 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vsx1Q91V10 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vsx1Q91V10 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Vsx1Q91V10 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.27□□□□□ -0.29
Vsx1Q91V10 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.27□□□□□ -0.29
Vsx1Q91V10 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Gm6222-202ENSMUST00000182143 629 ntBASIC13.27□□□□□ -0.29
Vsx1Q91V10 Gm37497-201ENSMUST00000195830 798 ntBASIC13.27□□□□□ -0.29
Vsx1Q91V10 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.27□□□□□ -0.29
Vsx1Q91V10 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.27□□□□□ -0.29
Vsx1Q91V10 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Nsd1-205ENSMUST00000224693 852 ntBASIC13.27□□□□□ -0.29
Vsx1Q91V10 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.27□□□□□ -0.29
Vsx1Q91V10 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx1Q91V10 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.26□□□□□ -0.29
Vsx1Q91V10 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms