Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Gm27772-201ENSMUST00000184900 187 ntBASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.92□□□□□ -0.34
Lsm1Q8VC85 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm1Q8VC85 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Gm13616-201ENSMUST00000120600 222 ntBASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms