Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Ddx54Q8K4L0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx54Q8K4L0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx54Q8K4L0 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ddx54Q8K4L0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx54Q8K4L0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx54Q8K4L0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Selenot-ps-201ENSMUST00000119098 593 ntBASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Gm8856-201ENSMUST00000185254 1144 ntBASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx54Q8K4L0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Gm44126-201ENSMUST00000204831 514 ntBASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Gm5904-201ENSMUST00000210286 865 ntBASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 AC123665.1-201ENSMUST00000228204 438 ntBASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx54Q8K4L0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Gm43908-201ENSMUST00000205074 1472 ntBASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Gm11597-201ENSMUST00000121423 964 ntBASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Gm43058-201ENSMUST00000197645 625 ntBASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Gm6458-201ENSMUST00000211573 635 ntBASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx54Q8K4L0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms