Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Zc3h3Q8CHP0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Zc3h3Q8CHP0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Zc3h3Q8CHP0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Zc3h3Q8CHP0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Zc3h3Q8CHP0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Gm16397-201ENSMUST00000122201 494 ntBASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Gm45219-201ENSMUST00000205602 465 ntBASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Gm44551-201ENSMUST00000208804 171 ntBASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Gm5904-201ENSMUST00000210286 865 ntBASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zc3h3Q8CHP0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Gm6407-201ENSMUST00000176468 549 ntBASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.04□□□□□ -0.32
Zc3h3Q8CHP0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms