Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Gm11618-201ENSMUST00000117946 267 ntBASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Gm6447-201ENSMUST00000118905 835 ntBASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Gm16177-201ENSMUST00000120728 718 ntBASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rdh1Q8CGV4 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Gm13369-201ENSMUST00000119442 987 ntBASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Gm4271-201ENSMUST00000174444 973 ntBASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Gm37922-201ENSMUST00000195596 455 ntBASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Gm9899-201ENSMUST00000065519 555 ntBASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rdh1Q8CGV4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Rdh1Q8CGV4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rdh1Q8CGV4 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rdh1Q8CGV4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rdh1Q8CGV4 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.02□□□□□ -0.32
Rdh1Q8CGV4 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rdh1Q8CGV4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Rdh1Q8CGV4 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rdh1Q8CGV4 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rdh1Q8CGV4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rdh1Q8CGV4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rdh1Q8CGV4 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Rdh1Q8CGV4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rdh1Q8CGV4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Rdh1Q8CGV4 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms