Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Gm6973-201ENSMUST00000117080 721 ntBASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Gm13365-201ENSMUST00000121188 973 ntBASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tsen54Q8C2A2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms