Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Syt7-205ENSMUST00000224135 1557 ntBASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Map1b-203ENSMUST00000223725 2669 ntBASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf220Q6PDX6 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rnf220Q6PDX6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms