Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn1Q64347 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC17.03■□□□□ 0.32
Clcn1Q64347 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn1Q64347 AC159747.1-201ENSMUST00000219903 265 ntBASIC17.03■□□□□ 0.32
Clcn1Q64347 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn1Q64347 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC17.03■□□□□ 0.32
Clcn1Q64347 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn1Q64347 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn1Q64347 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn1Q64347 Gm42829-201ENSMUST00000198417 2585 ntBASIC17.03■□□□□ 0.32
Clcn1Q64347 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn1Q64347 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC17.03■□□□□ 0.32
Clcn1Q64347 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn1Q64347 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn1Q64347 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC17.03■□□□□ 0.32
Clcn1Q64347 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn1Q64347 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC17.02■□□□□ 0.32
Clcn1Q64347 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn1Q64347 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn1Q64347 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.02■□□□□ 0.32
Clcn1Q64347 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn1Q64347 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn1Q64347 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Clcn1Q64347 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Clcn1Q64347 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Clcn1Q64347 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn1Q64347 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn1Q64347 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn1Q64347 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Clcn1Q64347 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Clcn1Q64347 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn1Q64347 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Clcn1Q64347 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Clcn1Q64347 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC17.02■□□□□ 0.32
Clcn1Q64347 Gm14350-201ENSMUST00000116642 640 ntBASIC17.02■□□□□ 0.32
Clcn1Q64347 Gm11793-201ENSMUST00000120433 981 ntBASIC17.02■□□□□ 0.32
Clcn1Q64347 Gm13342-201ENSMUST00000121055 207 ntBASIC17.02■□□□□ 0.32
Clcn1Q64347 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC17.02■□□□□ 0.32
Clcn1Q64347 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.02■□□□□ 0.32
Clcn1Q64347 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Clcn1Q64347 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC17.02■□□□□ 0.32
Clcn1Q64347 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC17.02■□□□□ 0.32
Clcn1Q64347 Gm25927-201ENSMUST00000175058 117 ntBASIC17.02■□□□□ 0.32
Clcn1Q64347 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn1Q64347 Gm38266-201ENSMUST00000194931 421 ntBASIC17.02■□□□□ 0.32
Clcn1Q64347 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC17.02■□□□□ 0.32
Clcn1Q64347 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC17.02■□□□□ 0.32
Clcn1Q64347 Cts7-204ENSMUST00000225321 1257 ntBASIC17.02■□□□□ 0.32
Clcn1Q64347 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn1Q64347 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn1Q64347 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn1Q64347 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn1Q64347 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Clcn1Q64347 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clcn1Q64347 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clcn1Q64347 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clcn1Q64347 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clcn1Q64347 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clcn1Q64347 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Clcn1Q64347 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
Clcn1Q64347 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Clcn1Q64347 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn1Q64347 Rubie-203ENSMUST00000227803 2430 ntBASIC17.01■□□□□ 0.31
Clcn1Q64347 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn1Q64347 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn1Q64347 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn1Q64347 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn1Q64347 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn1Q64347 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn1Q64347 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC17.01■□□□□ 0.31
Clcn1Q64347 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn1Q64347 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn1Q64347 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn1Q64347 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
Clcn1Q64347 Gm38144-201ENSMUST00000192790 465 ntBASIC17.01■□□□□ 0.31
Clcn1Q64347 Gm37922-201ENSMUST00000195596 455 ntBASIC17.01■□□□□ 0.31
Clcn1Q64347 Gm3961-201ENSMUST00000204425 994 ntBASIC17.01■□□□□ 0.31
Clcn1Q64347 Gm44064-201ENSMUST00000204964 1087 ntBASIC17.01■□□□□ 0.31
Clcn1Q64347 Gm45865-201ENSMUST00000211815 945 ntBASIC17.01■□□□□ 0.31
Clcn1Q64347 Gm18935-201ENSMUST00000212692 664 ntBASIC17.01■□□□□ 0.31
Clcn1Q64347 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn1Q64347 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Clcn1Q64347 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Clcn1Q64347 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Clcn1Q64347 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
Clcn1Q64347 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn1Q64347 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn1Q64347 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn1Q64347 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn1Q64347 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn1Q64347 Gm38094-201ENSMUST00000195864 2978 ntBASIC17.01■□□□□ 0.31
Clcn1Q64347 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn1Q64347 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Clcn1Q64347 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Clcn1Q64347 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC17■□□□□ 0.31
Clcn1Q64347 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clcn1Q64347 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clcn1Q64347 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clcn1Q64347 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Clcn1Q64347 Gm8805-201ENSMUST00000117848 313 ntBASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms