Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ss18Q62280 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ss18Q62280 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC9.94□□□□□ -0.82
Ss18Q62280 Ntrk2-204ENSMUST00000224259 3049 ntBASIC9.94□□□□□ -0.82
Ss18Q62280 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.94□□□□□ -0.82
Ss18Q62280 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC9.94□□□□□ -0.82
Ss18Q62280 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Ss18Q62280 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC9.94□□□□□ -0.82
Ss18Q62280 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Gm25925-201ENSMUST00000158314 306 ntBASIC9.94□□□□□ -0.82
Ss18Q62280 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ss18Q62280 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Ss18Q62280 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Ss18Q62280 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Ss18Q62280 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ss18Q62280 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Ss18Q62280 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ss18Q62280 Gm7899-201ENSMUST00000192935 1897 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ss18Q62280 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ss18Q62280 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC9.93□□□□□ -0.82
Ss18Q62280 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ss18Q62280 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ss18Q62280 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ss18Q62280 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC9.93□□□□□ -0.82
Ss18Q62280 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ss18Q62280 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ss18Q62280 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ss18Q62280 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ss18Q62280 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ss18Q62280 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ss18Q62280 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ss18Q62280 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ss18Q62280 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Ss18Q62280 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ss18Q62280 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ss18Q62280 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ss18Q62280 Gm22065-201ENSMUST00000103753 110 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Gm22066-201ENSMUST00000103761 110 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Gm24932-201ENSMUST00000103763 110 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Gm24115-201ENSMUST00000103799 110 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Gm22190-201ENSMUST00000103827 110 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Gm22191-201ENSMUST00000103831 110 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Gm24721-201ENSMUST00000103849 110 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Gm24543-201ENSMUST00000103867 82 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Gm28018-201ENSMUST00000103869 110 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Gm26399-201ENSMUST00000103937 110 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ss18Q62280 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ss18Q62280 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ss18Q62280 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC9.93□□□□□ -0.82
Ss18Q62280 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC9.93□□□□□ -0.82
Ss18Q62280 Gm26308-201ENSMUST00000157768 69 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Ss18Q62280 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ss18Q62280 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ss18Q62280 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC9.93□□□□□ -0.82
Ss18Q62280 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC9.93□□□□□ -0.82
Ss18Q62280 Gm25349-201ENSMUST00000177728 110 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Gm23616-201ENSMUST00000177797 110 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Gm25871-201ENSMUST00000177816 110 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Gm24752-201ENSMUST00000178240 110 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Gm24496-201ENSMUST00000178287 110 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Gm25649-201ENSMUST00000178476 110 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Gm25548-201ENSMUST00000178681 110 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Gm23147-201ENSMUST00000178841 110 ntBASIC9.93□□□□□ -0.82
Ss18Q62280 Gm26095-201ENSMUST00000179270 110 ntBASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms