Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Gm6218-201ENSMUST00000219812 628 ntBASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.3□□□□□ -0.12
Syne3Q4FZC9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Gm42612-201ENSMUST00000197986 623 ntBASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Gm43170-201ENSMUST00000199827 612 ntBASIC14.3□□□□□ -0.12
Syne3Q4FZC9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syne3Q4FZC9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Gm7488-201ENSMUST00000117148 684 ntBASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Gm27772-201ENSMUST00000184900 187 ntBASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Gm2423-201ENSMUST00000074863 733 ntBASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne3Q4FZC9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms