Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Gm28631-201ENSMUST00000190740 334 ntBASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdkl5Q3UTQ8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Cdkl5Q3UTQ8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdkl5Q3UTQ8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.58■□□□□ 0.09
Cdkl5Q3UTQ8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.58■□□□□ 0.09
Cdkl5Q3UTQ8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdkl5Q3UTQ8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdkl5Q3UTQ8 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdkl5Q3UTQ8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdkl5Q3UTQ8 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdkl5Q3UTQ8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdkl5Q3UTQ8 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl5Q3UTQ8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl5Q3UTQ8 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms