Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col10a1Q05306 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col10a1Q05306 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col10a1Q05306 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Col10a1Q05306 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.42□□□□□ -0.42
Col10a1Q05306 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Col10a1Q05306 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Col10a1Q05306 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.42□□□□□ -0.42
Col10a1Q05306 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.42□□□□□ -0.42
Col10a1Q05306 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.42□□□□□ -0.42
Col10a1Q05306 Mir7654-201ENSMUST00000185082 70 ntBASIC12.42□□□□□ -0.42
Col10a1Q05306 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.42□□□□□ -0.42
Col10a1Q05306 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Col10a1Q05306 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col10a1Q05306 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Col10a1Q05306 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col10a1Q05306 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.41□□□□□ -0.42
Col10a1Q05306 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col10a1Q05306 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Col10a1Q05306 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm13689-201ENSMUST00000119360 685 ntBASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.41□□□□□ -0.42
Col10a1Q05306 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm12403-201ENSMUST00000121384 959 ntBASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.41□□□□□ -0.42
Col10a1Q05306 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.41□□□□□ -0.42
Col10a1Q05306 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.41□□□□□ -0.42
Col10a1Q05306 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.41□□□□□ -0.42
Col10a1Q05306 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.41□□□□□ -0.42
Col10a1Q05306 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col10a1Q05306 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Col10a1Q05306 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.41□□□□□ -0.42
Col10a1Q05306 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col10a1Q05306 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.4□□□□□ -0.42
Col10a1Q05306 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms