Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atxn1P54254 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Atxn1P54254 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Atxn1P54254 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atxn1P54254 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atxn1P54254 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atxn1P54254 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atxn1P54254 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Atxn1P54254 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atxn1P54254 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Atxn1P54254 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atxn1P54254 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Atxn1P54254 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.35□□□□□ -0.27
Atxn1P54254 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.35□□□□□ -0.27
Atxn1P54254 Gm14381-201ENSMUST00000122105 414 ntBASIC13.35□□□□□ -0.27
Atxn1P54254 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.35□□□□□ -0.27
Atxn1P54254 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Atxn1P54254 Gm16505-201ENSMUST00000179981 232 ntBASIC13.35□□□□□ -0.27
Atxn1P54254 Gm29396-201ENSMUST00000185659 716 ntBASIC13.35□□□□□ -0.27
Atxn1P54254 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.35□□□□□ -0.27
Atxn1P54254 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.35□□□□□ -0.27
Atxn1P54254 Gm6082-201ENSMUST00000215204 454 ntBASIC13.35□□□□□ -0.27
Atxn1P54254 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.35□□□□□ -0.27
Atxn1P54254 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.35□□□□□ -0.27
Atxn1P54254 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.35□□□□□ -0.27
Atxn1P54254 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Atxn1P54254 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Atxn1P54254 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Atxn1P54254 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.35□□□□□ -0.27
Atxn1P54254 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.35□□□□□ -0.27
Atxn1P54254 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atxn1P54254 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Atxn1P54254 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Atxn1P54254 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Atxn1P54254 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Atxn1P54254 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Atxn1P54254 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.34□□□□□ -0.27
Atxn1P54254 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Atxn1P54254 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.34□□□□□ -0.27
Atxn1P54254 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.34□□□□□ -0.27
Atxn1P54254 Gm12203-201ENSMUST00000118235 598 ntBASIC13.34□□□□□ -0.27
Atxn1P54254 Gm12209-201ENSMUST00000120089 596 ntBASIC13.34□□□□□ -0.27
Atxn1P54254 Gm13385-201ENSMUST00000121089 220 ntBASIC13.34□□□□□ -0.27
Atxn1P54254 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.34□□□□□ -0.27
Atxn1P54254 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Atxn1P54254 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 Snora73a-201ENSMUST00000082453 205 ntBASIC13.34□□□□□ -0.27
Atxn1P54254 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.34□□□□□ -0.27
Atxn1P54254 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Atxn1P54254 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.34□□□□□ -0.27
Atxn1P54254 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atxn1P54254 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Atxn1P54254 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Atxn1P54254 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Atxn1P54254 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Atxn1P54254 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Atxn1P54254 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Atxn1P54254 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Atxn1P54254 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Atxn1P54254 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms