Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Sox1P53783 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Sox1P53783 Gm10179-201ENSMUST00000086233 688 ntBASIC13.69□□□□□ -0.22
Sox1P53783 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Sox1P53783 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Sox1P53783 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sox1P53783 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.68□□□□□ -0.22
Sox1P53783 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sox1P53783 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.68□□□□□ -0.22
Sox1P53783 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sox1P53783 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.68□□□□□ -0.22
Sox1P53783 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.68□□□□□ -0.22
Sox1P53783 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox1P53783 Gm7003-201ENSMUST00000195089 312 ntBASIC13.68□□□□□ -0.22
Sox1P53783 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox1P53783 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox1P53783 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.68□□□□□ -0.22
Sox1P53783 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.68□□□□□ -0.22
Sox1P53783 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sox1P53783 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Sox1P53783 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sox1P53783 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox1P53783 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sox1P53783 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox1P53783 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox1P53783 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Sox1P53783 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Sox1P53783 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Gm14109-201ENSMUST00000118814 309 ntBASIC13.67□□□□□ -0.22
Sox1P53783 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sox1P53783 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Sox1P53783 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox1P53783 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox1P53783 Gm38210-201ENSMUST00000191944 809 ntBASIC13.67□□□□□ -0.22
Sox1P53783 Gm29741-201ENSMUST00000192667 421 ntBASIC13.67□□□□□ -0.22
Sox1P53783 Gm44069-201ENSMUST00000204898 506 ntBASIC13.67□□□□□ -0.22
Sox1P53783 Gm4768-201ENSMUST00000206199 686 ntBASIC13.67□□□□□ -0.22
Sox1P53783 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox1P53783 Gm45224-201ENSMUST00000208203 414 ntBASIC13.67□□□□□ -0.22
Sox1P53783 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.67□□□□□ -0.22
Sox1P53783 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox1P53783 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms