Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm11025-201ENSMUST00000140773 466 ntBASIC11.28□□□□□ -0.6
Hmx3P42581 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.28□□□□□ -0.6
Hmx3P42581 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.28□□□□□ -0.6
Hmx3P42581 Gm5264-201ENSMUST00000190584 848 ntBASIC11.28□□□□□ -0.6
Hmx3P42581 Gm6443-201ENSMUST00000203599 874 ntBASIC11.28□□□□□ -0.6
Hmx3P42581 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.28□□□□□ -0.6
Hmx3P42581 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.28□□□□□ -0.6
Hmx3P42581 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Hmx3P42581 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hmx3P42581 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Hmx3P42581 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hmx3P42581 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hmx3P42581 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hmx3P42581 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hmx3P42581 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hmx3P42581 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Hmx3P42581 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hmx3P42581 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hmx3P42581 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Hmx3P42581 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hmx3P42581 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
Hmx3P42581 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hmx3P42581 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.27□□□□□ -0.61
Hmx3P42581 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmx3P42581 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmx3P42581 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hmx3P42581 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmx3P42581 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.27□□□□□ -0.61
Hmx3P42581 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.27□□□□□ -0.61
Hmx3P42581 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.27□□□□□ -0.61
Hmx3P42581 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmx3P42581 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmx3P42581 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.27□□□□□ -0.61
Hmx3P42581 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmx3P42581 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmx3P42581 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.27□□□□□ -0.61
Hmx3P42581 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.27□□□□□ -0.61
Hmx3P42581 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Hmx3P42581 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.27□□□□□ -0.61
Hmx3P42581 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmx3P42581 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmx3P42581 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmx3P42581 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.27□□□□□ -0.61
Hmx3P42581 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.27□□□□□ -0.61
Hmx3P42581 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hmx3P42581 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hmx3P42581 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmx3P42581 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.26□□□□□ -0.61
Hmx3P42581 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hmx3P42581 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.26□□□□□ -0.61
Hmx3P42581 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.26□□□□□ -0.61
Hmx3P42581 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Hmx3P42581 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Gm11543-201ENSMUST00000120758 370 ntBASIC11.26□□□□□ -0.61
Hmx3P42581 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.26□□□□□ -0.61
Hmx3P42581 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Gm8000-201ENSMUST00000188378 592 ntBASIC11.26□□□□□ -0.61
Hmx3P42581 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.26□□□□□ -0.61
Hmx3P42581 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.26□□□□□ -0.61
Hmx3P42581 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.26□□□□□ -0.61
Hmx3P42581 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.26□□□□□ -0.61
Hmx3P42581 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.26□□□□□ -0.61
Hmx3P42581 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.26□□□□□ -0.61
Hmx3P42581 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmx3P42581 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms