Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.66□□□□□ -0.38
Sox6P40645 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sox6P40645 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.66□□□□□ -0.38
Sox6P40645 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox6P40645 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.66□□□□□ -0.38
Sox6P40645 Gm44344-201ENSMUST00000200287 129 ntBASIC12.66□□□□□ -0.38
Sox6P40645 Gm46209-201ENSMUST00000217912 553 ntBASIC12.66□□□□□ -0.38
Sox6P40645 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.66□□□□□ -0.38
Sox6P40645 Shd-206ENSMUST00000225145 998 ntBASIC12.66□□□□□ -0.38
Sox6P40645 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sox6P40645 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sox6P40645 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Sox6P40645 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sox6P40645 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.66□□□□□ -0.38
Sox6P40645 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sox6P40645 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.66□□□□□ -0.38
Sox6P40645 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox6P40645 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Sox6P40645 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox6P40645 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Sox6P40645 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sox6P40645 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Sox6P40645 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sox6P40645 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Sox6P40645 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.65□□□□□ -0.38
Sox6P40645 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.65□□□□□ -0.38
Sox6P40645 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.65□□□□□ -0.38
Sox6P40645 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.65□□□□□ -0.38
Sox6P40645 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sox6P40645 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sox6P40645 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.65□□□□□ -0.38
Sox6P40645 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox6P40645 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sox6P40645 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sox6P40645 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox6P40645 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sox6P40645 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.64□□□□□ -0.39
Sox6P40645 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sox6P40645 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.64□□□□□ -0.39
Sox6P40645 Gm38294-201ENSMUST00000192831 381 ntBASIC12.64□□□□□ -0.39
Sox6P40645 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.64□□□□□ -0.39
Sox6P40645 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.64□□□□□ -0.39
Sox6P40645 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sox6P40645 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sox6P40645 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.64□□□□□ -0.39
Sox6P40645 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sox6P40645 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms