Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
H2afxP27661 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afxP27661 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
H2afxP27661 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afxP27661 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
H2afxP27661 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
H2afxP27661 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H2afxP27661 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afxP27661 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
H2afxP27661 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H2afxP27661 Gm6659-201ENSMUST00000174752 547 ntBASIC14.02□□□□□ -0.17
H2afxP27661 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.02□□□□□ -0.17
H2afxP27661 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.02□□□□□ -0.17
H2afxP27661 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.02□□□□□ -0.17
H2afxP27661 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
H2afxP27661 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
H2afxP27661 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afxP27661 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H2afxP27661 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.02□□□□□ -0.17
H2afxP27661 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afxP27661 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afxP27661 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afxP27661 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afxP27661 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afxP27661 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afxP27661 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afxP27661 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H2afxP27661 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
H2afxP27661 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.01□□□□□ -0.17
H2afxP27661 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.01□□□□□ -0.17
H2afxP27661 Gm15173-201ENSMUST00000122049 433 ntBASIC14.01□□□□□ -0.17
H2afxP27661 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
H2afxP27661 Gm44124-201ENSMUST00000204159 472 ntBASIC14.01□□□□□ -0.17
H2afxP27661 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
H2afxP27661 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.01□□□□□ -0.17
H2afxP27661 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
H2afxP27661 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H2afxP27661 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afxP27661 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
H2afxP27661 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14□□□□□ -0.17
H2afxP27661 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H2afxP27661 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14□□□□□ -0.17
H2afxP27661 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
H2afxP27661 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
H2afxP27661 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14□□□□□ -0.17
H2afxP27661 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14□□□□□ -0.17
H2afxP27661 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
H2afxP27661 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14□□□□□ -0.17
H2afxP27661 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
H2afxP27661 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afxP27661 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
H2afxP27661 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afxP27661 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
H2afxP27661 AC090659.1-201ENSMUST00000224334 768 ntBASIC14□□□□□ -0.17
H2afxP27661 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afxP27661 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14□□□□□ -0.17
H2afxP27661 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14□□□□□ -0.17
H2afxP27661 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14□□□□□ -0.17
H2afxP27661 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afxP27661 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H2afxP27661 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14□□□□□ -0.17
H2afxP27661 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
H2afxP27661 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
H2afxP27661 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afxP27661 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afxP27661 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afxP27661 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.99□□□□□ -0.17
H2afxP27661 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afxP27661 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afxP27661 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afxP27661 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afxP27661 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afxP27661 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H2afxP27661 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.99□□□□□ -0.17
H2afxP27661 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
H2afxP27661 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms