Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.25□□□□□ -0.45
Cbx3P23198 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cbx3P23198 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cbx3P23198 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cbx3P23198 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.25□□□□□ -0.45
Cbx3P23198 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cbx3P23198 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cbx3P23198 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cbx3P23198 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.24□□□□□ -0.45
Cbx3P23198 Gm24589-201ENSMUST00000116692 94 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 Gm11764-201ENSMUST00000120221 623 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 Gm44357-201ENSMUST00000195897 142 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 Gm19658-201ENSMUST00000196231 138 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 Gm44367-201ENSMUST00000196836 138 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 Gm44350-201ENSMUST00000197197 138 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 Gm44390-201ENSMUST00000197533 144 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 Gm44313-201ENSMUST00000198018 138 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 Gm44486-201ENSMUST00000198508 138 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 Gm44314-201ENSMUST00000199263 138 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 Gm44394-201ENSMUST00000199558 138 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 Gm44484-201ENSMUST00000199873 138 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 Gm44466-201ENSMUST00000200264 138 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 Gm44359-201ENSMUST00000200671 138 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.24□□□□□ -0.45
Cbx3P23198 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cbx3P23198 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Cbx3P23198 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cbx3P23198 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cbx3P23198 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cbx3P23198 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Cbx3P23198 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cbx3P23198 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.24□□□□□ -0.45
Cbx3P23198 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cbx3P23198 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.23□□□□□ -0.45
Cbx3P23198 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.23□□□□□ -0.45
Cbx3P23198 Gm7230-201ENSMUST00000173026 815 ntBASIC12.23□□□□□ -0.45
Cbx3P23198 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cbx3P23198 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.23□□□□□ -0.45
Cbx3P23198 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cbx3P23198 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms