Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.62□□□□□ -0.55
Hoxa6P09092 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.62□□□□□ -0.55
Hoxa6P09092 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.62□□□□□ -0.55
Hoxa6P09092 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.62□□□□□ -0.55
Hoxa6P09092 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hoxa6P09092 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Hoxa6P09092 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Gm27839-201ENSMUST00000184242 106 ntBASIC11.62□□□□□ -0.55
Hoxa6P09092 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.62□□□□□ -0.55
Hoxa6P09092 Gm38671-201ENSMUST00000200573 130 ntBASIC11.62□□□□□ -0.55
Hoxa6P09092 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Hoxa6P09092 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hoxa6P09092 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Hoxa6P09092 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.62□□□□□ -0.55
Hoxa6P09092 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Hoxa6P09092 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Hoxa6P09092 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hoxa6P09092 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa6P09092 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa6P09092 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.61□□□□□ -0.55
Hoxa6P09092 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Hoxa6P09092 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa6P09092 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.61□□□□□ -0.55
Hoxa6P09092 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.61□□□□□ -0.55
Hoxa6P09092 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Gm15770-201ENSMUST00000117498 584 ntBASIC11.61□□□□□ -0.55
Hoxa6P09092 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.61□□□□□ -0.55
Hoxa6P09092 Gm29127-201ENSMUST00000188304 517 ntBASIC11.61□□□□□ -0.55
Hoxa6P09092 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxa6P09092 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.61□□□□□ -0.55
Hoxa6P09092 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.61□□□□□ -0.55
Hoxa6P09092 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa6P09092 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa6P09092 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxa6P09092 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Hoxa6P09092 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Hoxa6P09092 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.61□□□□□ -0.55
Hoxa6P09092 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Hoxa6P09092 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa6P09092 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa6P09092 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms