Protein–RNA interactions for Protein: O54798

Brs3, Bombesin receptor subtype-3, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brs3O54798 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Brs3O54798 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Brs3O54798 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Brs3O54798 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.15□□□□□ -0.62
Brs3O54798 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Brs3O54798 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.15□□□□□ -0.62
Brs3O54798 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.15□□□□□ -0.62
Brs3O54798 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Brs3O54798 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Brs3O54798 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Brs3O54798 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Brs3O54798 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Brs3O54798 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Brs3O54798 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Brs3O54798 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.15□□□□□ -0.63
Brs3O54798 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Brs3O54798 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Brs3O54798 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Brs3O54798 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Brs3O54798 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Brs3O54798 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Gm12485-201ENSMUST00000119641 291 ntBASIC11.14□□□□□ -0.63
Brs3O54798 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.14□□□□□ -0.63
Brs3O54798 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.14□□□□□ -0.63
Brs3O54798 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.14□□□□□ -0.63
Brs3O54798 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.14□□□□□ -0.63
Brs3O54798 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Brs3O54798 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Brs3O54798 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Brs3O54798 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Brs3O54798 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Brs3O54798 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.14□□□□□ -0.63
Brs3O54798 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brs3O54798 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.13□□□□□ -0.63
Brs3O54798 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.13□□□□□ -0.63
Brs3O54798 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.13□□□□□ -0.63
Brs3O54798 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.13□□□□□ -0.63
Brs3O54798 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.13□□□□□ -0.63
Brs3O54798 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.13□□□□□ -0.63
Brs3O54798 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.13□□□□□ -0.63
Brs3O54798 Gm15806-201ENSMUST00000120696 955 ntBASIC11.13□□□□□ -0.63
Brs3O54798 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.13□□□□□ -0.63
Brs3O54798 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Gm2445-201ENSMUST00000182798 989 ntBASIC11.13□□□□□ -0.63
Brs3O54798 Gm28911-201ENSMUST00000188837 117 ntBASIC11.13□□□□□ -0.63
Brs3O54798 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.13□□□□□ -0.63
Brs3O54798 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.13□□□□□ -0.63
Brs3O54798 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.13□□□□□ -0.63
Brs3O54798 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Brs3O54798 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brs3O54798 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms