Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Pkd1O08852 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Pkd1O08852 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
Pkd1O08852 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC8.23□□□□□ -1.09
Pkd1O08852 Gm8894-201ENSMUST00000074642 666 ntBASIC8.23□□□□□ -1.09
Pkd1O08852 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pkd1O08852 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pkd1O08852 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC8.22□□□□□ -1.09
Pkd1O08852 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Pkd1O08852 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC8.22□□□□□ -1.09
Pkd1O08852 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Gm11960-202ENSMUST00000181063 2858 ntBASIC8.22□□□□□ -1.09
Pkd1O08852 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC8.22□□□□□ -1.09
Pkd1O08852 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC8.22□□□□□ -1.09
Pkd1O08852 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC8.22□□□□□ -1.09
Pkd1O08852 Gm5733-201ENSMUST00000190232 939 ntBASIC8.22□□□□□ -1.09
Pkd1O08852 Gm18974-201ENSMUST00000221478 1031 ntBASIC8.22□□□□□ -1.09
Pkd1O08852 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 AC108416.1-202ENSMUST00000228927 1201 ntBASIC8.22□□□□□ -1.09
Pkd1O08852 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pkd1O08852 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pkd1O08852 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC8.22□□□□□ -1.09
Pkd1O08852 Gm14460-201ENSMUST00000121511 639 ntBASIC8.22□□□□□ -1.09
Pkd1O08852 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC8.22□□□□□ -1.09
Pkd1O08852 AC159103.1-201ENSMUST00000228325 429 ntBASIC8.22□□□□□ -1.09
Pkd1O08852 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC8.22□□□□□ -1.09
Pkd1O08852 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Pkd1O08852 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Pkd1O08852 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC8.22□□□□□ -1.09
Pkd1O08852 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pkd1O08852 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC8.22□□□□□ -1.09
Pkd1O08852 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Pkd1O08852 Gm14999-201ENSMUST00000121039 624 ntBASIC8.22□□□□□ -1.09
Pkd1O08852 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC8.22□□□□□ -1.09
Pkd1O08852 AC165260.3-202ENSMUST00000224550 1031 ntBASIC8.22□□□□□ -1.09
Pkd1O08852 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pkd1O08852 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Pkd1O08852 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC8.21□□□□□ -1.09
Pkd1O08852 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Pkd1O08852 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pkd1O08852 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pkd1O08852 Gm8494-201ENSMUST00000178171 1233 ntBASIC8.21□□□□□ -1.09
Pkd1O08852 Gm28388-201ENSMUST00000186262 437 ntBASIC8.21□□□□□ -1.09
Pkd1O08852 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC8.21□□□□□ -1.09
Pkd1O08852 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Pkd1O08852 Gm45242-201ENSMUST00000210666 2129 ntBASIC8.21□□□□□ -1.09
Pkd1O08852 AC163667.3-201ENSMUST00000225774 222 ntBASIC8.21□□□□□ -1.09
Pkd1O08852 Prrxl1-205ENSMUST00000228878 723 ntBASIC8.21□□□□□ -1.09
Pkd1O08852 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pkd1O08852 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pkd1O08852 Gm9996-201ENSMUST00000070359 913 ntBASIC8.21□□□□□ -1.09
Pkd1O08852 Snora73b-201ENSMUST00000083419 205 ntBASIC8.21□□□□□ -1.09
Pkd1O08852 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Pkd1O08852 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pkd1O08852 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pkd1O08852 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Pkd1O08852 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pkd1O08852 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pkd1O08852 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC8.21□□□□□ -1.09
Pkd1O08852 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pkd1O08852 Gm15432-201ENSMUST00000121106 195 ntBASIC8.21□□□□□ -1.1
Pkd1O08852 Gm6039-201ENSMUST00000121667 1250 ntBASIC8.21□□□□□ -1.1
Pkd1O08852 Gm17889-201ENSMUST00000198410 598 ntBASIC8.21□□□□□ -1.1
Pkd1O08852 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms