Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pcf11G3X9Z4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcf11G3X9Z4 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcf11G3X9Z4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Gm13736-201ENSMUST00000119272 253 ntBASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Gm12502-201ENSMUST00000120197 444 ntBASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Gm12997-201ENSMUST00000120207 640 ntBASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Gm12715-201ENSMUST00000121430 1128 ntBASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Gm43416-201ENSMUST00000201916 1015 ntBASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Mettl6-204ENSMUST00000227595 1027 ntBASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcf11G3X9Z4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pcf11G3X9Z4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcf11G3X9Z4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcf11G3X9Z4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Gm43399-201ENSMUST00000202546 2374 ntBASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Gm2420-202ENSMUST00000202224 2249 ntBASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Gm10676-201ENSMUST00000098778 3221 ntBASIC20.01■□□□□ 0.79
Pcf11G3X9Z4 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Gm8908-201ENSMUST00000121633 1024 ntBASIC20■□□□□ 0.79
Pcf11G3X9Z4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Gm44094-201ENSMUST00000204703 2030 ntBASIC20■□□□□ 0.79
Pcf11G3X9Z4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC20■□□□□ 0.79
Pcf11G3X9Z4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC20■□□□□ 0.79
Pcf11G3X9Z4 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcf11G3X9Z4 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcf11G3X9Z4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 AC166491.1-201ENSMUST00000227053 2308 ntBASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 Gm45242-201ENSMUST00000210666 2129 ntBASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcf11G3X9Z4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms