Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Gm29127-201ENSMUST00000188304 517 ntBASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Gm29741-201ENSMUST00000192667 421 ntBASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Gm38671-201ENSMUST00000200573 130 ntBASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cfap99A0A140LIX9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cfap99A0A140LIX9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cfap99A0A140LIX9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cfap99A0A140LIX9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Gm13689-201ENSMUST00000119360 685 ntBASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Cfap99A0A140LIX9 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Gm12485-201ENSMUST00000119641 291 ntBASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfap99A0A140LIX9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Matn2-206ENSMUST00000228570 2798 ntBASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms