Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm5177-201ENSMUST00000183092 997 ntBASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Mir5131-201ENSMUST00000175426 93 ntBASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 AC164629.2-201ENSMUST00000217916 270 ntBASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm11543-201ENSMUST00000120758 370 ntBASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm43332-201ENSMUST00000202511 1044 ntBASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms