Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Gm44719-201ENSMUST00000206404 149 ntBASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Gm15393-201ENSMUST00000120499 219 ntBASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.3□□□□□ -0.6
Trav5-4A0A075B652 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Gm38294-201ENSMUST00000192831 381 ntBASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5-4A0A075B652 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms