Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bl1Q9D701 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Upk3bl1Q9D701 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bl1Q9D701 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Upk3bl1Q9D701 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bl1Q9D701 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bl1Q9D701 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.3□□□□□ -0.44
Upk3bl1Q9D701 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bl1Q9D701 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.3□□□□□ -0.44
Upk3bl1Q9D701 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bl1Q9D701 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.3□□□□□ -0.44
Upk3bl1Q9D701 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bl1Q9D701 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bl1Q9D701 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bl1Q9D701 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bl1Q9D701 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bl1Q9D701 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bl1Q9D701 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Gm27920-201ENSMUST00000183953 96 ntBASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Gm17971-201ENSMUST00000190239 806 ntBASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bl1Q9D701 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bl1Q9D701 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3bl1Q9D701 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3bl1Q9D701 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3bl1Q9D701 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Upk3bl1Q9D701 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3bl1Q9D701 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Upk3bl1Q9D701 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3bl1Q9D701 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bl1Q9D701 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms