Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Gm18660-201ENSMUST00000199542 629 ntBASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 AC153899.1-201ENSMUST00000214092 1117 ntBASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Gm25857-201ENSMUST00000082788 129 ntBASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retreg3Q9CQV4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 AC163296.2-201ENSMUST00000220177 1315 ntBASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Gm15376-201ENSMUST00000122258 783 ntBASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Gm28180-201ENSMUST00000189608 722 ntBASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Gm38313-201ENSMUST00000191953 1266 ntBASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Gm21190-202ENSMUST00000196384 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Gm43094-201ENSMUST00000196549 921 ntBASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.73□□□□□ -0.21
Retreg3Q9CQV4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retreg3Q9CQV4 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms