Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Gm37917-201ENSMUST00000194711 392 ntBASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Gm15376-201ENSMUST00000122258 783 ntBASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa3Q9CQ71 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms