Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.09□□□□□ -0.31
Rnf111Q99ML9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Gm3436-201ENSMUST00000179930 840 ntBASIC13.09□□□□□ -0.31
Rnf111Q99ML9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf111Q99ML9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Rnf111Q99ML9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rnf111Q99ML9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rnf111Q99ML9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rnf111Q99ML9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rnf111Q99ML9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Gm27321-201ENSMUST00000185021 205 ntBASIC13.08□□□□□ -0.32
Rnf111Q99ML9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Gm43703-201ENSMUST00000200523 763 ntBASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Gm9063-201ENSMUST00000223299 582 ntBASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf111Q99ML9 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.07□□□□□ -0.32
Rnf111Q99ML9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Gm15393-201ENSMUST00000120499 219 ntBASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms