Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Gm12403-201ENSMUST00000121384 959 ntBASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Gm16505-201ENSMUST00000179981 232 ntBASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Gm13123-201ENSMUST00000122173 492 ntBASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Mospd4-201ENSMUST00000180618 576 ntBASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx6-1Q99MA9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Gm11591-201ENSMUST00000120063 702 ntBASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.61□□□□□ -0.39
Nkx6-1Q99MA9 Gm22902-201ENSMUST00000158488 302 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms