Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp1b1Q99LU0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp1b1Q99LU0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp1b1Q99LU0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp1b1Q99LU0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Chmp1b1Q99LU0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Chmp1b1Q99LU0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp1b1Q99LU0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Gm4875-201ENSMUST00000118257 786 ntBASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Gm4804-201ENSMUST00000182234 999 ntBASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Mir7684-201ENSMUST00000183858 60 ntBASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Gm43703-201ENSMUST00000200523 763 ntBASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Gm9063-201ENSMUST00000223299 582 ntBASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp1b1Q99LU0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Gm12151-201ENSMUST00000121374 290 ntBASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Mir6977-201ENSMUST00000184960 64 ntBASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Gm27321-201ENSMUST00000185021 205 ntBASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Gm5425-201ENSMUST00000214125 459 ntBASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Gm7775-201ENSMUST00000218871 853 ntBASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms