Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lims1Q99JW4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.31□□□□□ -0.44
Lims1Q99JW4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.31□□□□□ -0.44
Lims1Q99JW4 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.3□□□□□ -0.44
Lims1Q99JW4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Gm27680-201ENSMUST00000184192 160 ntBASIC12.3□□□□□ -0.44
Lims1Q99JW4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.3□□□□□ -0.44
Lims1Q99JW4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lims1Q99JW4 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Gm3436-201ENSMUST00000179930 840 ntBASIC12.29□□□□□ -0.44
Lims1Q99JW4 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.29□□□□□ -0.44
Lims1Q99JW4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.29□□□□□ -0.44
Lims1Q99JW4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lims1Q99JW4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.28□□□□□ -0.44
Lims1Q99JW4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms