Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Gm6916-202ENSMUST00000205523 195 ntBASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Gm46209-201ENSMUST00000217912 553 ntBASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Gm9229-201ENSMUST00000222777 126 ntBASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhac1Q91Y10 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Gm27306-201ENSMUST00000183970 107 ntBASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Gm27321-201ENSMUST00000185021 205 ntBASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Gm38294-201ENSMUST00000192831 381 ntBASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Gm18041-201ENSMUST00000218210 618 ntBASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Mir497b-201ENSMUST00000093601 125 ntBASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhac1Q91Y10 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhac1Q91Y10 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhac1Q91Y10 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhac1Q91Y10 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhac1Q91Y10 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhac1Q91Y10 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhac1Q91Y10 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhac1Q91Y10 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhac1Q91Y10 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms