Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Gm18905-201ENSMUST00000205454 928 ntBASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.3□□□□□ -0.6
H1fooQ8VIK3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.3□□□□□ -0.6
H1fooQ8VIK3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H1fooQ8VIK3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.29□□□□□ -0.6
H1fooQ8VIK3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Gm25925-201ENSMUST00000158314 306 ntBASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.29□□□□□ -0.6
H1fooQ8VIK3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Gm17795-201ENSMUST00000214505 757 ntBASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H1fooQ8VIK3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms